2017

Obeidat M, Nie Y, Chen V, Shannon CP, Andiappan AK, Lee B, Rotzschke O, Castaldi PJ, Hersh CP, Fishbane N, Ng R, McManus B, Miller BE, Rennard S, Paré PD, Sin DD. Network-Based Analysis Reveals Novel Gene Signatures in Peripheral Blood of Patients with Chronic Obstructive Pulmonary Disease. [Accepted for publication in Respiratory Research]

Chen RY, Chen V, Hollander Z, Leipsic JA, Hague CJ, DeMarco ML, FitzGerald JM, McManus BM, Ng RT, Sin DDC-reactive Protein and N-Terminal Prohormone Brain Natriuretic Peptide as Biomarkers in Acute Exacerbations of COPD Leading to Hospitalizations. PLoS One. 2017 Mar 22;12(3):e0174063. DOI: 10.1371/journal.pone.0174063

Toma M, Mak GJ, Chen V, Hollander Z, Shannon CP, Lam KKY, Ng RT, Tebbutt SJ, Wilson-McManus JE, Ignaszewski A, Anderson T, Dyck JRB, Howlett J, Ezekowitz J, McManus BM,Oudit GY. Differentiating heart failure phenotypes using sex-specific transcriptomic and proteomic biomarker panels. ESC Heart Failure. 2017 March. DOI: 10.1002/ehf2.12136

Sharma A, Kirkpatrick G, Skolnik K, Chen V, Hollander Z, Wilcox P, Quon BS. Clinical utility of C-reactive protein to predict treatment response during cystic fibrosis pulmonary exacerbations. PLoS One. 2017 Feb 8;12(2):e0171229. DOI: 10.1371/journal.pone.0171229

Hollander Z, DeMarco ML, Sadatsafavi M, McManus BM, Ng RT, Sin DD. Biomarker Development in COPD: Moving from P-Values to Products to Impact Patient Care. Chest. 2017 Feb 1. 151(2):455-467. DOI: 10.1016/j.chest.2016.09.012

Khakban A, Sin DD, FitzGerald JM, McManus B, Ng R, Hollander Z, Sadatsafavi M. The Projected Epidemic of COPD Hospitalizations Over the Next 15 Years: A Population Based Perspective. Am J Respir Crit Care Med. 2017 Feb 1;195(3):287-291. DOI: 10.1164/rccm.201606-1162PP

Sukma Dewi I, Hollander Z, Lam KK, McManus JW, Tebbutt SJ, Ng RT, Keown PA, McMaster RW, McManus BM, Gidlöf O, Öhman J. Association of Serum MiR-142-3p and MiR-101-3p Levels with Acute Cellular Rejection after Heart Transplantation. PLoS One. 2017 Jan 26;12(1):e0170842. DOI: 10.1371/journal.pone.0170842

Sukma Dewi I, Celik S, Karlsson A, Hollander Z, Lam K, McManus JW, Tebbutt S, Ng R, Keown P, McMaster R, Bruce M. McManus, Öhman J, Gidlöf O. Exosomal miR-142-3p is increased during cardiac allograft rejection and augments vascular permeability through down-regulation of endothelial RAB11FIP2 expression. Cardiovasc Res. 2017 Jan 10. pii: cvw244. DOI: 10.1093/cvr/cvw244

Shannon CP, Balshaw R, Chen V, Hollander Z, Toma M, McManus BM, Fitzgerald JM, Sin DD, Ng RT, Tebbutt SJ. Enumerateblood – an R package to estimate the cellular composition of whole blood from Affymetrix Gene ST gene expression profiles. BMC Genomics. 2017 Jan 6;18(1):43. DOI: 10.1186/s12864-016-3460-1

2016

Shannon CP, Chen V, Takhar M, Hollander Z, Balshaw R, McManus BM, Tebbutt SJ, Sin DD, Ng RT. SABRE: a method for assessing the stability of gene modules in complex tissues and subject populations. BMC Bioinformatics. 2016 Nov 14;17(1):460.

Zafari Z, Sin DD, Postma D, Lofdahl, CG, Vonk J, Bryan S, Lam S, Tammemagi M, Khakban R, Man SF, Tashkin D, Wise R, Connett J, McManus B, Ng R, Hollander Z, Sadatsafavi M. Individualised Prediction of Lung Function Decline in COPD. CMAJ. 2016 Oct 4;188(14):1004-1011. DOI: 10.1503/cmaj.151483

Obeidat M, Ding X, Fishbane N, Hollander Z, Ng RT, McManus BM, Miller BE, Rennard S, Paré  PD, Sin DD. The Effect of Different Case Definitions of Current Smoking on the Discovery of Smoking-Related Blood Gene Expression Signatures in Chronic Obstructive Pulmonary Disease. Nicotine Tob Res. 2016 Sep;18(9):1903-9. DOI: 10.1093/ntr/ntw129

Singh A, Gautier B, Shannon CP, Vacher M, Rohart F, Tebutt SJ, Le Cao KA. DIABLO – an integrative, multi-omics, multivariate method for multi-group classification. bioRxiv 067611; DOI: 10.1101/067611 [Preprint]

Leung J, Chen V, Hollander Z, Dai D, Tebbutt S, Aaron SD, Vandemheen KL, Rennard SI, FitzGerald MJ, Woodruff PG, Lazarus SC, Connett JE, Coxson HO, Miller B, Borchers CH, McManus BM, Ng RT, Sin DD. COPD Exacerbation Biomarkers Validated Using Multiple Reaction Monitoring Mass Spectrometry. PLoS One. 2016 Aug 15;11(8):e0161129. DOI: 10.1371/journal.pone.0161129

Meredith AJ, Dai DL, Chen V, Hollander Z, Ng R, Kaan A, Tebbutt S, Ramanathan K, Cheung A, McManus BM. Circulating biomarker responses to medical management vs. mechanical circulatory support in severe inotrope-dependent acute heart failure. ESC Heart Fail. 2016 Jun;3(2):86-96. DOI: 10.1002/ehf2.12076

Pesenacker AM, Wang AY, Singh A, Gillies J, Kim YW, Piccirillo CA, Nguyen C, Haining WN, Tebbutt SJ, Panagiotopoulos C, Levings MK. A Regulatory T-Cell Gene Signature Is a Specific and Sensitive Biomarker to Identify Children With New-Onset Type 1 Diabetes. Diabetes. Apr 2016, 65 (4) 1031-1039; DOI: 10.2337/db15-0572

Croft CA, Culibrk L, Moore MM, Tebbutt SJ (2016) Interactions of Aspergillus fumigatus Conidia with Airway Epithelial Cells: A Critical Review. Front. Microbiol. 7:472. DOI: 10.3389/fmicb.2016.00472

Rider CF, Yamamoto M, Günther OP, Hirota JA, Singh A, Tebbutt SJ, Carlsten C. Diesel exhaust and allergen modulate miRNA and RNA in intact human epithelium. Journal of Allergy and Clinical Immunology (2016), DOI: 10.1016/j.jaci.2016.02.038

Fung G, Luo H, Qiu Y, Yang D, McManus B. Myocarditis. Circulation Research. February 2016; 118: 496-514. DOI: 10.1161/CIRCRESAHA.115.306573

Culibrk L, Croft CA, Tebbutt SJ. Systems Biology Approaches for Host–Fungal Interactions: An Expanding Multi-Omics Frontier. OMICS A Journal of Integrative Biology, 20(3). DOI: 10.1089/omi.2015.0185

Tkacova R, Dai DLY, Vonk JM, Leung JM, Himstra PS, Van den Berge M, Kunz L, Hollander Z, Tashkin, D, Wise R, Connett J, NG RT, McManus BM, Man P, Postma DS, Sin DD. Airway Hyperresponsiveness in COPD: A Marker of Asthma-COPD Overlap Syndrome?. J Allergy Clin Immunol. 2016 Dec;138(6):1571-1579.e10. DOI: 10.1016/j.jaci.2016.04.022

2015

Lane J, van Eeden SF, Obeidat M, Sin DD, Tebbutt SJ, Timens W, et al. (2015) Impact of Statins on Gene Expression in Human Lung Tissues. PLoS ONE 10(11): e0142037. DOI:10.1371/journal. pone.0142037

Obeidat M, Fishbane N, Nie Y, Chen V, Hollander Z, Tebbutt SJ, et al. (2015) The Effect of Statins on Blood Gene Expression in COPD. PLoS ONE 10(10): e0140022. DOI:10.1371/journal.pone.0140022

Straube J, Gorse A-D, PROOF Centre of Excellence Team, Huang BE, Lê Cao K-A (2015) A Linear Mixed Model Spline Framework for Analysing Time Course ‘Omics’ Data. PLoS ONE 10(8): e0134540. DOI:10.1371/journal.pone.0134540

Sin DD, Hollander Z, DeMarco ML, McManus BM, Ng RT. Biomarker Development for COPD: From Discovery to Clinical Implementation. Am J Respir Crit Care Med. 2015 July 15. DOI: 10.1164/rccm.201505-0871PP

Khakban A, Sin DD, FitzGerald JM, Ng R, Zafari Z, McManus B, Hollander Z, Marra CA, Sadatsafavi M. 10-Year Trends in Direct Costs of COPD: A Population Based Study. Chest. 2015 Jun 4. DOI: 10.1378/chest.15-0721.

Quon B, Dai DLY, Hollander Z, Ng RT, Tebbutt S, Wilcox S, Sin DD. Discovery Of Novel Plasma Protein Biomarkers To Predict Imminent Cystic Fibrosis Pulmonary Exacerbations Using Multiple Reaction Monitoring Mass Spectrometry. Thorax. 2015 Mar 16. DOI: 10.1136/thoraxjnl-2014-206710. [Epub ahead of print]

Tremlett H, Dai DLY, Hollander Z, Kapanen A, Aziz T, Wilson-McManus JE; Tebbutt SJ, Borchers CH, Oger J, Cohen Freue GV. Serum Proteomics in Multiple Sclerosis Disease Progression. J Proteomics. 2015 Apr 6;118:2-11. DOI: 10.1016/j.jprot.2015.02.018

Hollander, Z., Dai, D. L.Y., Putko, B. N., Yogasundaram, H., Wilson-McManus, J. E., Thompson, R. B., Khan, A., West, M. L., McManus, B. M. and Oudit, G. Y. (2015), Gender-specific plasma proteomic biomarkers in patients with Anderson–Fabry disease. European Journal of Heart Failure, 17: 291–300. DOI: 10.1002/ejhf.230

2014

Günther Oliver P., Shin Heesun, Ng Raymond T., McMaster W. Robert, McManus Bruce M., Keown Paul A., Tebbutt Scott. J., and Lê Cao Kim-Anh. Novel Multivariate Methods for Integration of Genomics and Proteomics Data: Applications in a Kidney Transplant Rejection Study. OMICS: A Journal of Integrative Biology. November 2014, 18(11): 682-695. DOI:10.1089/omi.2014.0062.

Singh A, Yamamoto M, Ruan J, Choi JY, Gauvreau GM, Olek S, Hoffmueller U, Carlsten C, FitzGerald MJ, Boulet L-P, O’Byrne PM, Tebbutt SJ. Th17/Treg ratio derived using DNA methylation analysis is associated with the late phase asthmatic response. Allergy, Asthma & Clinical Immunology 2014 June; 10(1):32

Hollander Z, Lazarova M, Lam KKY, Ignaszewski A, Oudit GY, Dyck J, Schreiner G, Pauwels J, Chen V, Cohen Freue GV, Ng RT, Wilson-McManus J, Balshaw R, Tebbutt S, McMaster R, Keown PA, McManus BM. Proteomic Biomarkers of Recovered Heart Function. Eur J Heart Fail. 2014 May;16(5):551-9

Shannon CP, Balshaw R, Ng RT, Wilson-McManus JE, Keown P, McMaster R, McManus BM, Landsberg D, Isbel NM, Knoll G, Tebbutt SJ. Two-Stage, In Silico Deconvolution of the Lymphocyte Compartment of the Peripheral Whole Blood Transcriptome in the Context of Acute Kidney Allograft Rejection. PLoS ONE. 2014 April; 9(4):e95224

Shin H, Shannon CP, Fishbane N, Ruan J, Zhou M, Balshaw R, Wilson-McManus JE, Ng RT, McManus BM, and Tebbutt SJ. Variation in RNA-Seq transcriptome profiles of peripheral whole blood from healthy individuals with and without globin depletion. PLoS ONE. 2014 March; 9(3):e91041

Shin H, Günther OP, Hollander Z, Wilson-McManus JE, Ng RT, Balshaw RF, Keown PA, McMaster R, McManus BM, Isbel NM, Knoll G, Tebbutt SJ. Longitudinal Analysis of Whole Blood Transcriptomes to Explore Molecular Signatures Associated With Acute Renal Allograft Rejection. Bioinformatics and Biology Insights. 2014 January; 8:17-33

2013

Meredith AJ, McManus BM. Vitamin D in Heart Failure. J Cardiac Failure. 2013 Oct; 10(19):692-711

Lin D, Cohen Freue G, Hollander Z, Mancini J, Sasaki M, Mui A, Wilson-McManus J, Ignaszewski A, Imai C, Meredith A, Balshaw R, Ng R.T., Keown P.A., McMaster R, Carere R, Webb G, McManus BM. Plasma protein bio-signature for detection of cardiac allograft vasculopathy. J Heart Lung Transplant. 2013 July; 32(7):723-733

Singh A, Yamamoto M, Kam SHY, Ruan J, Gauvreau GM, O’Byrne PM, FitzGerald JM, Schellenberg R, Boulet L-P, Wojewodka G, Kanagaratham C, De Sanctis J, Radzioch D, Tebbutt SJ.  Gene-metabolite expression in blood can discriminate allergen-induced isolated early from dual asthmatic responses. PLOS ONE 2013 July; 8(7):e67907

Scherer A, Günther OP, Balshaw R, Hollander Z, Wilson-McManus J, Ng R, McMaster R, McManus BM, Keown P. Alteration of human gene expression profile in uremia. BMC Med Genomics. 2013 Jun 28;6(1):23

Yamamoto M, Singh A, Tebbutt SJ, Carlsten C.  MicroRNA Expression in Response to Controlled Exposure to Diesel Exhaust: Attenuation by the Antioxidant n-Acetylcysteine in a Randomized Crossover Study. Environmental Health Perspectives 2013 June; 121(6):670-5

Cohen Freue G, Meredith A, Smith D, Bergman A, Sasaki M, Lam K, Hollander Z, Opushneva N, Takhar M, Lin D, Wilson-McManus J, Balshaw R, Keown P, Borchers C, McManus BM, Ng R.T. Computational biomarker pipeline from discovery to clinical implementation; plasma proteomic biomarkers for cardiac transplantation. PLoS Comput biol, 2013 Apr; 9(4):e1002963

Hollander Z, Chen V, Lin D, Ng R.T., Balshaw R, Cohen Freue G, Ignaszewski A, Imai C, Kaan A, Wilson-McManus J, McMaster R, Keown P, McManus BM. Predicting acute cardiac allograft rejection using donor and recipient gene expression. J Heart Lung Transplant. 2013 Feb; 32(2):259-65

2012

Günther OP, Chen V, Cohen Freue G, Balshaw RF, Tebbutt SJ, Hollander Z, Takhar M, McMaster R, McManus BM, Keown PA, Ng R. A computational pipeline for the development of multi marker bio-signature panels and ensemble classifiers. BMC Bioinformatics. 2012 December; 13:326

Yamamoto M, Singh A, Ruan J, Gauvreau GM, O’Byrne PM, Carlsten C, FitzGerald JM, Boulet L-P, Tebbutt SJ.  Decreased miR-192 expression in peripheral blood of asthmatic individuals undergoing an allergen inhalation challenge. BMC Genomics November 2012; 13(1):655

Singh A, Cohen Freue GV, Oosthuizen JL, Kam SHY, Ruan J, Takhar M, Gauvreau GM, O’Byrne PM, FitzGerald JM, Boulet L-P, Borchers CH. Tebbutt SJ. Plasma proteomics can discriminate isolated early from dual responses in asthmatic individuals undergoing an allergen inhalation challenge. Proteomics Clinical Applications 2012 October; 6(9-10):476-485

Najafzadeh M, Marra CA, Lynd LD, Sadatsafavi M, FitzGerald JM, et al. (2012) Future Impact of Various Interventions on the Burden of COPD in Canada: A Dynamic Population Model. PLoS ONE. 2012 October; 7(10):e46746

Domanski D, Cohen Freue G, Sojo L, Kuzyk MA, Ratkay L, Parker CE, Goldberg P, Borchers CH. The use of multiplexed MRM for the discovery of biomarkers to differentiate iron-deficiency anemia from anemia of inflammation. Journal of Proteomics. 2012 Jun 27;75(12):3514-28

Domanski D, Percy AJ, Yang J, Chambers AG, Hill JS, Cohen Freue G, Borchers, CH. MRM-based multiplexed quantitation of 67 putative cardiovascular disease biomarkers in human plasma. Journal of Proteomics. 2012 April; 12(8):1222-1243

Shannon C, Hollander Z, Wilson-McManus J, Balshaw RF, Ng RT, McMaster R, McManus BM, Keown P, Tebbutt SJ. White Blood Cell Differentials Enrich Whole Blood Expression Data in the Context of Acute Cardiac Allograft Rejection. Bioinform and Biology Insights. 2012 April; 6:49-61

Kam SH, Singh A, He JQ, Ruan J, Gauvreau GM, O’Byrne PM, Fitzgerald JM, Tebbutt SJ. Peripheral blood gene expression changes during allergen inhalation challenge in atopic asthmatic individuals. J Asthma. 2012 Apr;49(3):219-26. doi: 10.3109/02770903.2011.654300

Tebbutt SJ, He JQ, Singh A, Shannon CP, Ruan J, Carlsten C. Transcriptional Changes of Blood Eosinophils After Methacholine Inhalation Challenge in Asthmatics. Genomics Insights. 2012 Jan 30;5:1-12. DOI: 10.4137/GEI.S9125

2011

Lin D, Hollander Z, Meredith A, Stadnick E, Sasaki M, Cohen Freue G, Qasimi P, Mui A, Ng RT, Balshaw RF, Wilson-McManus JE, Wishart D, Hau D, Keown PA, McMaster R, McManus BM. Molecular signatures of end-stage heart failure. Journal of Cardiac Failure. 2011 October; 17(10):867-874

Domanski D, Smith DS, Miller CA, Yang Y, Jackson AM, Cohen Freue G, Hill JS, Parker CE, Borchers CH. High-flow multiplexed MRM-based analysis of proteins in human plasma without depletion or enrichment. Clin Lab Med. 2011 Sep;31(3):371-84

Balshaw RF, Cohen Freue GV. Case study 2: Proteomic biomarkers for disease status. The Canadian Journal of Statistics. 2011 June; 39(2):195-196

Carthy JM, Garmaroudi FS, Luo Z, McManus BM. Wnt3a induces myofibroblast differentiation by upregulating TGF-β signaling through SMAD2 in a β-catenin-dependent manner. PLoS ONE. 2011 May; 6(5):e19809

Stanley R, McManus B, Ng R, Gombocz E, Eshleman J, Rockey C. Case Study: Applied semantic knowledgebase for detection of patients at risk of organ failure through immune rejection. 2011 March; World Wide Web Consortium (W3C), p.1-6

Gunther OP, Lin d, Balshaw RF, Ng RT, Hollander Z, Wilson-McManus J, McMaster WR, McManus B, Keown PA. Effects of sample timing and treatment on gene expression in early acute renal allograft rejection. Transplantation. 2011 Feb; 91(3):323-329

Psychogios N, Hau D, Peng J, Guo AC, Mandal R, Bouatra S, Sinelnikov I, Krishnamurthy R, Eisner R, Gautam B, Young N, Xia J, Knox C, Dong E, Huang P, Hollander Z, Pedersen T, Bamforth F, Greiner R, McManus B, Newman J, Wishart DS. The human serum metabolome. PLoS ONE. 2011 Feb; 6(2):e16957

2010

Hollander Z, Lin D, Chen V, Ng R, Wilson-McManus J, Ignaszewski A, Cohen Freue G, Balshaw R, Mui A, McMaster R, Keown PA, McManus BM for the NCE CECR PROOF Centre of Excellence. Whole Blood Biomarkers of Acute Cardiac Allograft Rejection: Double-Crossing the Biopsy. Transplantation. 2010 Dec; 90(12):1388-93

Cohen Freue G,V Sasaki M, Meredith A, Günther OP, Bergman A, Takhar M, Mui A, Balshaw RF, Ng RT, Opushneva N, Hollander Z, Guiyun L, Borchers C, Wilson-McManus J, McManus BM, Keown PA, McMaster WR for the Genome Canada Biomarkers in Transplantation Group. Proteomic signatures in plasma during early acute renal allograft rejection. Mol Cell Proteomics. 2010 Sept; 9:1954-1967

Keown P, McMaster R, McManus B. Tools to identify organ rejection and immune quiescence for biological understanding and personalized medical care. Biomarkers in Medicine. 2010 Feb; 4(1):115-121

2009

Günther O, Balshaw R, Scherer A, Hollander Z, Mui A, Triche T, Cohen Freue G, Li G, Ng R, Wilson-McManus J, McMaster WR, McManus BM, Keown PA for the Biomarkers in Transplantation Team. Functional genomic analysis of peripheral blood during early acute renal allograft rejection. Transplantation. 2009 Oct; 88(7):942-951

Lin D, Hollander Z, Ng RT, Imai C, Ignaszewski A, Balshaw R, Cohen Freue G, Wilson-McManus JE, Qasimi P, Mui A, Triche T, McMaster R, Keown PA, McManus BM for the Biomarkers in Transplantation Team. Whole blood genomic biomarkers of acute heart allograft rejection. The Journal of Heart and Lung Transplantation. 2009 Sept; 28(9): 927-935

McManus B. Trends in genomic biomarkers. Heart and Metabolism. 2009 Aug; 43:19-21

Lin D, Hollander Z, Meredith A, McManus B. Searching for “Omic” biomarkers. The Canadian Journal of Cardiology. 2009 Jun; 25(A):9A-14A

Chailimpamontree W, Dmitrienko S, Li G, Balshaw R, Magil A, Shapiro RJ, Landsberg D, Gill J, Keown PA for the Biomarkers in Transplantation Team. Probability, predictors, and prognosis of posttransplantation glomerulonephritis. Journal of the American Society of Nephrology. 2009 Apr; 20(4):843-851

Barraclough KA, Landsberg DN, Shapiro RJ, Gill JS, Li G, Balshaw RF, Chailimpamontree W, Keown PA for the Biomarkers in Transplantation Team. A matched cohort pharmacoepidemiological analysis of steroid free immunosuppression in renal transplantation. Transplantation. 2009 Mar; 87(5):672-680

Dmitrienko S, Balshaw R, Machnicki G, Shapiro RJ, Keown PA. Probabilistic modeling of cytomegalovirus infection under consensus clinical management guidelines. Transplantation. 2009 Feb; 28(9): 927-935

2008

Fujii H, Cuvelier G, She K, Aslanian S, Shimizu H, Kariminia A, Chen Z, McMaster R, Bergman A, Goldman F, Grupp S, Wall D, Gilman A, Schultz, K. Biomarkers in newly diagnosed pediatric extensive chronic graft-versus-host disease: a report from the children’s oncology group. Blood. 2008 Mar; 111(6):3276-3285

McManus B. Searching for better biomarkers of heart risk and disease. Current Cardiovascular Risk Reports. 2008 Mar; 2(2):79-81

2007

Cohen Freue G, Hollander Z, Shen E, Zamar RH, Balshaw R, Scherer A, McManus B, Keown P, McMaster R, Ng RT. MDQC: a new quality assessment method for microarrays based on quality control reports. Bioinformatics. 2007 Dec; 23(23): 3162-3169

Dmitrienko S, Yu A, Balshaw R, Shapiro RJ, Keown P for the Genome Canada Biomarkers in Transplantation Group. The use of consensus guidelines for management of cytomegalovirus infection in renal transplantation. Kidney International. 2007 Oct; 72(8): 1014–1022

Cohen-Freue G, Holzer G, Forney TR and McMaster WR. Global gene expression in leishmania. International Journal for Parasitology 2007 Aug; 37(10): 1077-1086

2006

Good BM, Kawas EA, Kuo BY, Wilkinson MD. IHOPerator: user-scripting a personalized bioinformatics web, starting with the ihop website. BMC Bioinformatics. 2006 Dec; 7: 534

Kulkarni MM, McMaster WR, Kamysz E, Kamysz W, Engman DM, & McGwire BS. The major surface-metalloprotease of the parasitic protozoan, leishmania, protects against antimicrobial peptide-induced apoptotic killing. Molecular Microbiology. 2006 Dec; 62(5): 1484-97

Rahmani M, Cruz R, Granville D, McManus B. Allograft vasculopathy versus atherosclerosis. Circulation Research. 2006 Oct; 99: 801-815

Wen R, Wu V, Dmitrienko S, Yu A, Balshaw R, Keown PA and the Biomarkers in Transplantation Group. Biomarkers in Transplantation: Prospective, blinded measurement of predictive value for the flow cytometry crossmatch after negative antiglobulin crossmatch in kidney transplantation. Kidney International 2006 Oct; 70(8): 1474-1481

Good B, Wilkinson M. The life science semantic web is full of creeps! Briefings in bioinformatics 2006 Sept; 7(3): 275-286

Rahmani M, Wong BW, Ang L, Cheung CC, Carthy JM, Walinski H, McManus BM. Versican: signaling to transcriptional control pathways. Canadian Journal of Physiology and Pharmacology 2006 Jan; 84: 77-92